Enrichment analysis

Content tagged with Enrichment analysis

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New publications from the DRSC bioinformatics team

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The DRSC bioinformatics team, led by Dr. Claire Yanhui Hu, has recently published two new papers. One reports development of BioLitMine, an advanced literature mining resource. The other provides an overview of our online resources, which can be grouped...

Now Available: Our 2017 NAR database issue update

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Read about the DRSC/TRiP Functional Genomics Resources online tools and more in our 2017 Nucleic Acids Research database issue update publication. Tables 1 & 2 in particular are meant to give you a quick look at what online tools we offer and how they fit...

Bibliographic References tagged with Enrichment analysis

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Yanhui Hu, Aram Comjean, Jonathan Rodiger, Yifang Liu, Yue Gao, Verena Chung, Jonathan Zirin, Norbert Perrimon, and Stephanie Mohr. 2020. “FlyRNAi.Org-the Database of the Drosophila RNAi Screening Center and Transgenic RNAi Project: 2021 Update”. Nucleic Acids Res. doi:10.1093/nar/gkaa936
Yanhui Hu, Aram Comjean, Jonathan Rodiger, Yifang Liu, Yue Gao, Verena Chung, Jonathan Zirin, Norbert Perrimon, and Stephanie Mohr. 2020. “FlyRNAi.Org-the Database of the Drosophila RNAi Screening Center and Transgenic RNAi Project: 2021 Update”. Nucleic Acids Res. doi:10.1093/nar/gkaa936
Yanhui Hu, Verena Chung, Aram Comjean, Jonathan Rodiger, Fnu Nipun, Norbert Perrimon, and Stephanie Mohr. 2020. “BioLitMine: Advanced Mining of Biomedical and Biological Literature About Human Genes and Genes from Major Model Organisms”. G3 (Bethesda). doi:10.1534/g3.120.401775
Yanhui Hu, Verena Chung, Aram Comjean, Jonathan Rodiger, Fnu Nipun, Norbert Perrimon, and Stephanie Mohr. 2020. “BioLitMine: Advanced Mining of Biomedical and Biological Literature About Human Genes and Genes from Major Model Organisms”. G3 (Bethesda). doi:10.1534/g3.120.401775
Yanhui Hu, Aram Comjean, Charles Roesel, Arunachalam Vinayagam, Ian Flockhart, Jonathan Zirin, Lizabeth Perkins, Norbert Perrimon, and Stephanie Mohr. 2016. “FlyRNAi.Org—the Database of the Drosophila RNAi Screening Center and Transgenic RNAi Project: 2017 Update”. Nucleic Acids Research
Yanhui Hu, Aram Comjean, Charles Roesel, Arunachalam Vinayagam, Ian Flockhart, Jonathan Zirin, Lizabeth Perkins, Norbert Perrimon, and Stephanie Mohr. 2016. “FlyRNAi.Org—the Database of the Drosophila RNAi Screening Center and Transgenic RNAi Project: 2017 Update”. Nucleic Acids Research
Kiger, Baum, Jones, Jones, Coulson, Echeverri, and Perrimon. 2003. “A Functional Genomic Analysis of Cell Morphology Using RNA Interference.”. J Biol, 2, 4, Pp. 27. doi:10.1186/1475-4924-2-27
Kiger, Baum, Jones, Jones, Coulson, Echeverri, and Perrimon. 2003. “A Functional Genomic Analysis of Cell Morphology Using RNA Interference.”. J Biol, 2, 4, Pp. 27. doi:10.1186/1475-4924-2-27
Susan Armknecht, Michael Boutros, Amy Kiger, Kent Nybakken, Bernard Mathey-Prevot, and Norbert Perrimon. 2005. “High-Throughput RNA Interference Screens in Drosophila Tissue Culture Cells.”. Methods Enzymol, 392, Pp. 55-73. doi:10.1016/S0076-6879(04)92004-6
Susan Armknecht, Michael Boutros, Amy Kiger, Kent Nybakken, Bernard Mathey-Prevot, and Norbert Perrimon. 2005. “High-Throughput RNA Interference Screens in Drosophila Tissue Culture Cells.”. Methods Enzymol, 392, Pp. 55-73. doi:10.1016/S0076-6879(04)92004-6
Sara Cherry, Tammy Doukas, Susan Armknecht, Sean Whelan, Hui Wang, Peter Sarnow, and Norbert Perrimon. 2005. “Genome-Wide RNAi Screen Reveals a Specific Sensitivity of IRES-Containing RNA Viruses to Host Translation Inhibition.”. Genes Dev, 19, 4, Pp. 445-52. doi:10.1101/gad.1267905
Sara Cherry, Tammy Doukas, Susan Armknecht, Sean Whelan, Hui Wang, Peter Sarnow, and Norbert Perrimon. 2005. “Genome-Wide RNAi Screen Reveals a Specific Sensitivity of IRES-Containing RNA Viruses to Host Translation Inhibition.”. Genes Dev, 19, 4, Pp. 445-52. doi:10.1101/gad.1267905
Gyeong-Hun Baeg, Rui Zhou, and Norbert Perrimon. 2005. “Genome-Wide RNAi Analysis of JAK STAT Signaling Components in Drosophila.”. Genes Dev, 19, 16, Pp. 1861-70. doi:10.1101/gad.1320705
Gyeong-Hun Baeg, Rui Zhou, and Norbert Perrimon. 2005. “Genome-Wide RNAi Analysis of JAK STAT Signaling Components in Drosophila.”. Genes Dev, 19, 16, Pp. 1861-70. doi:10.1101/gad.1320705
Christophe Echeverri and Norbert Perrimon. 2006. “High-Throughput RNAi Screening in Cultured Cells: A User’s Guide.”. Nat Rev Genet, 7, 5, Pp. 373-84. doi:10.1038/nrg1836
Christophe Echeverri and Norbert Perrimon. 2006. “High-Throughput RNAi Screening in Cultured Cells: A User’s Guide.”. Nat Rev Genet, 7, 5, Pp. 373-84. doi:10.1038/nrg1836
Ramanuj DasGupta, Kent Nybakken, Matthew Booker, Bernard Mathey-Prevot, Foster Gonsalves, Binita Changkakoty, and Norbert Perrimon. 2007. “A Case Study of the Reproducibility of Transcriptional Reporter Cell-Based RNAi Screens in Drosophila.”. Genome Biol, 8, 9, Pp. R203. doi:10.1186/gb-2007-8-9-r203
Ramanuj DasGupta, Kent Nybakken, Matthew Booker, Bernard Mathey-Prevot, Foster Gonsalves, Binita Changkakoty, and Norbert Perrimon. 2007. “A Case Study of the Reproducibility of Transcriptional Reporter Cell-Based RNAi Screens in Drosophila.”. Genome Biol, 8, 9, Pp. R203. doi:10.1186/gb-2007-8-9-r203
Eric Wagner, Brandon Burch, Ashley Godfrey, Harmony Salzler, Robert Duronio, and William Marzluff. 2007. “A Genome-Wide RNA Interference Screen Reveals That Variant Histones Are Necessary for Replication-Dependent Histone Pre-MRNA Processing.”. Mol Cell, 28, 4, Pp. 692-9. doi:10.1016/j.molcel.2007.10.009
Eric Wagner, Brandon Burch, Ashley Godfrey, Harmony Salzler, Robert Duronio, and William Marzluff. 2007. “A Genome-Wide RNA Interference Screen Reveals That Variant Histones Are Necessary for Replication-Dependent Histone Pre-MRNA Processing.”. Mol Cell, 28, 4, Pp. 692-9. doi:10.1016/j.molcel.2007.10.009