Zebrafish

Content tagged with Zebrafish

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New publications from the DRSC bioinformatics team

News
The DRSC bioinformatics team, led by Dr. Claire Yanhui Hu, has recently published two new papers. One reports development of BioLitMine, an advanced literature mining resource. The other provides an overview of our online resources, which can be grouped...

DRSC Bioinformatics launches iProteinDB and BioLitMine

News
We have two new online tools available: iProteinDB and BioLitMine. Both continue our series of resources aimed at integrating existing information in new ways to facilitate data mining and development of new hypotheses. In addition, iProteinDB includes a...

New automated imaging at the DRSC

News
The DRSC/TRiP-FGR is pleased to announce that we recently updated our high-throughput, high-content imaging system. Through funds from NIH, HHMI, and the Harvard Medical School Tools & Technology program, we were able to get a GE IN Cell 6000 automated...

DIOPT 6.0 released -- with eggNOG and paralog searches added

News
DIOPT 6.0 went live this week. Newly added features include results from eggNOG, bringing the total number of alrogithms incorporated in our integrated search tool to 14. In addition, you can now search for paralogs. To do this, choose the same species...

Now Available: Our 2017 NAR database issue update

News
Read about the DRSC/TRiP Functional Genomics Resources online tools and more in our 2017 Nucleic Acids Research database issue update publication. Tables 1 & 2 in particular are meant to give you a quick look at what online tools we offer and how they fit...

"One vs. All" a new feature in our ortholog search tool

News
Our DIOPT ortholog search tool has been updated to include the option to search for orthologs of a gene in all other species included. So you can search with, for example, a fly gene, and see orthologs in human, mouse, rat, frog, worm, and yeast. Click on...

DRSC & TRiP at TAGC 2016

News
We have begun preparing for our participation at TAGC 2016 in Orlando, FL. We will be presenting a workshop on functional genomics for cross-species studies, as well as participating in the poster session. Want to talk with experts in cell or in vivo RNAi...

Bibliographic References tagged with Zebrafish

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Ramanuj DasGupta, Ajamete Kaykas, Randall Moon, and Norbert Perrimon. 2005. “Functional Genomic Analysis of the Wnt-Wingless Signaling Pathway.”. Science, 308, 5723, Pp. 826-33. doi:10.1126/science.1109374
Ramanuj DasGupta, Ajamete Kaykas, Randall Moon, and Norbert Perrimon. 2005. “Functional Genomic Analysis of the Wnt-Wingless Signaling Pathway.”. Science, 308, 5723, Pp. 826-33. doi:10.1126/science.1109374
Lorna Kategaya, Binita Changkakoty, Travis Biechele, William Conrad, Ajamete Kaykas, Ramanuj DasGupta, and Randall Moon. 2009. “Bili Inhibits Wnt Beta-Catenin Signaling by Regulating the Recruitment of Axin to LRP6.”. PLoS One, 4, 7, Pp. e6129. doi:10.1371/journal.pone.0006129
Lorna Kategaya, Binita Changkakoty, Travis Biechele, William Conrad, Ajamete Kaykas, Ramanuj DasGupta, and Randall Moon. 2009. “Bili Inhibits Wnt Beta-Catenin Signaling by Regulating the Recruitment of Axin to LRP6.”. PLoS One, 4, 7, Pp. e6129. doi:10.1371/journal.pone.0006129
Yanhui Hu, Ian Flockhart, Arunachalam Vinayagam, Clemens Bergwitz, Bonnie Berger, Norbert Perrimon, and Stephanie Mohr. 2011. “An Integrative Approach to Ortholog Prediction for Disease-Focused and Other Functional Studies.”. BMC Bioinformatics, 12, Pp. 357. doi:10.1186/1471-2105-12-357
Yanhui Hu, Ian Flockhart, Arunachalam Vinayagam, Clemens Bergwitz, Bonnie Berger, Norbert Perrimon, and Stephanie Mohr. 2011. “An Integrative Approach to Ortholog Prediction for Disease-Focused and Other Functional Studies.”. BMC Bioinformatics, 12, Pp. 357. doi:10.1186/1471-2105-12-357