Drosophila (fly)

Content tagged with Drosophila (fly)

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DIOPT 6.0 released -- with eggNOG and paralog searches added

News
DIOPT 6.0 went live this week. Newly added features include results from eggNOG, bringing the total number of alrogithms incorporated in our integrated search tool to 14. In addition, you can now search for paralogs. To do this, choose the same species...

Now Available: Our 2017 NAR database issue update

News
Read about the DRSC/TRiP Functional Genomics Resources online tools and more in our 2017 Nucleic Acids Research database issue update publication. Tables 1 & 2 in particular are meant to give you a quick look at what online tools we offer and how they fit...

"One vs. All" a new feature in our ortholog search tool

News
Our DIOPT ortholog search tool has been updated to include the option to search for orthologs of a gene in all other species included. So you can search with, for example, a fly gene, and see orthologs in human, mouse, rat, frog, worm, and yeast. Click on...

Is it a hit? On mining our data sets.

News
The DRSC/TRiP-FGR's FlyRNAi database stores results from the many cell-based screens done since 2003 using DRSC Drosophila RNAi libraries. It also stores information about knockdown and phenotypes resulting from specific combinations of in vivo RNAi fly...

Publication describes TRiP resources

News
Liz Perkins and colleagues have published a paper describing the Drosophila Transgenic RNAi Project (TRiP) at Harvard Medical School. The article, published in the November 1, 2015 issue of Genetics, details the TRiP production pipeline , reagents...

DRSC & TRiP at TAGC 2016

News
We have begun preparing for our participation at TAGC 2016 in Orlando, FL. We will be presenting a workshop on functional genomics for cross-species studies, as well as participating in the poster session. Want to talk with experts in cell or in vivo RNAi...

Beta-testing a "Drosophila Protocols Portal"

News
The DRSC-FGR has developed a beta version of a database and online search for protocols, the Drosophila Protocols Portal, relevant to Drosophila research. The goal is to provide a central portal for protocols distributed across the web. We collected...

Bibliographic References tagged with Drosophila (fly)

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Alfeu Zanotto-Filho, Ravi Dashnamoorthy, Eva Loranc, Luis Souza, José Moreira, Uthra Suresh, Yidong Chen, and Alexander Bishop. 2016. “Combined Gene Expression and RNAi Screening to Identify Alkylation Damage Survival Pathways from Fly to Human.”. PLoS One, 11, 4, Pp. e0153970. doi:10.1371/journal.pone.0153970
Alfeu Zanotto-Filho, Ravi Dashnamoorthy, Eva Loranc, Luis Souza, José Moreira, Uthra Suresh, Yidong Chen, and Alexander Bishop. 2016. “Combined Gene Expression and RNAi Screening to Identify Alkylation Damage Survival Pathways from Fly to Human.”. PLoS One, 11, 4, Pp. e0153970. doi:10.1371/journal.pone.0153970
Shu Kondo and Norbert Perrimon. 2011. “A Genome-Wide RNAi Screen Identifies Core Components of the G₂-M DNA Damage Checkpoint.”. Sci Signal, 4, 154, Pp. rs1. doi:10.1126/scisignal.2001350
Shu Kondo and Norbert Perrimon. 2011. “A Genome-Wide RNAi Screen Identifies Core Components of the G₂-M DNA Damage Checkpoint.”. Sci Signal, 4, 154, Pp. rs1. doi:10.1126/scisignal.2001350
Vig, Peinelt, Beck, Koomoa, Rabah, Koblan-Huberson, Kraft, Turner, Fleig, Penner, and Kinet. 2006. “CRACM1 Is a Plasma Membrane Protein Essential for Store-Operated Ca2+ Entry.”. Science, 312, 5777, Pp. 1220-3. doi:10.1126/science.1127883
Vig, Peinelt, Beck, Koomoa, Rabah, Koblan-Huberson, Kraft, Turner, Fleig, Penner, and Kinet. 2006. “CRACM1 Is a Plasma Membrane Protein Essential for Store-Operated Ca2+ Entry.”. Science, 312, 5777, Pp. 1220-3. doi:10.1126/science.1127883
Matthew Booker, Anastasia Samsonova, Young Kwon, Ian Flockhart, Stephanie Mohr, and Norbert Perrimon. 2011. “False Negative Rates in Drosophila Cell-Based RNAi Screens: A Case Study.”. BMC Genomics, 12, Pp. 50. doi:10.1186/1471-2164-12-50
Matthew Booker, Anastasia Samsonova, Young Kwon, Ian Flockhart, Stephanie Mohr, and Norbert Perrimon. 2011. “False Negative Rates in Drosophila Cell-Based RNAi Screens: A Case Study.”. BMC Genomics, 12, Pp. 50. doi:10.1186/1471-2164-12-50
Shenyuan Zhang, Andriy Yeromin, Xiang Zhang, Ying Yu, Olga Safrina, Aubin Penna, Jack Roos, Kenneth Stauderman, and Michael Cahalan. 2006. “Genome-Wide RNAi Screen of Ca(2+) Influx Identifies Genes That Regulate Ca(2+) Release-Activated Ca(2+) Channel Activity.”. Proc Natl Acad Sci U S A, 103, 24, Pp. 9357-62. doi:10.1073/pnas.0603161103
Shenyuan Zhang, Andriy Yeromin, Xiang Zhang, Ying Yu, Olga Safrina, Aubin Penna, Jack Roos, Kenneth Stauderman, and Michael Cahalan. 2006. “Genome-Wide RNAi Screen of Ca(2+) Influx Identifies Genes That Regulate Ca(2+) Release-Activated Ca(2+) Channel Activity.”. Proc Natl Acad Sci U S A, 103, 24, Pp. 9357-62. doi:10.1073/pnas.0603161103