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Image analysis

Content tagged with Image analysis

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DRSC&TRiP at ASCB|EMBO 2018

Event
The DRSC & TRiP will be represented at the ASCB|EMBO 2018 conference in the form of a poster that includes information about our collaboration with O. Kanca in the H. Bellen lab at Baylor College of Medicine to tag Drosophila S2R+ cell lines with GFP...

Nucleolar image-based screen dataset viewable online with OMERO

News
The DRSC has worked with the HMS Image Data Management Core to make a ~3 TB image fluorescence confocal screen image dataset from the screen reported in Neumuller et al. available online. And not just available--with several interaction options! At the...

New automated imaging at the DRSC

News
The DRSC/TRiP-FGR is pleased to announce that we recently updated our high-throughput, high-content imaging system. Through funds from NIH, HHMI, and the Harvard Medical School Tools & Technology program, we were able to get a GE IN Cell 6000 automated...

Bibliographic References tagged with Image analysis

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Joel Swenson, Serafin Colmenares, Amy Strom, Sylvain Costes, and Gary Karpen. 2016. “The Composition and Organization of Drosophila Heterochromatin Are Heterogeneous and Dynamic.”. Elife, 5. doi:10.7554/eLife.16096
Joel Swenson, Serafin Colmenares, Amy Strom, Sylvain Costes, and Gary Karpen. 2016. “The Composition and Organization of Drosophila Heterochromatin Are Heterogeneous and Dynamic.”. Elife, 5. doi:10.7554/eLife.16096
Katharine Sepp, Pengyu Hong, Sofia Lizarraga, Judy Liu, Luis Mejia, Christopher Walsh, and Norbert Perrimon. 2008. “Identification of Neural Outgrowth Genes Using Genome-Wide RNAi.”. PLoS Genet, 4, 7, Pp. e1000111. doi:10.1371/journal.pgen.1000111
Katharine Sepp, Pengyu Hong, Sofia Lizarraga, Judy Liu, Luis Mejia, Christopher Walsh, and Norbert Perrimon. 2008. “Identification of Neural Outgrowth Genes Using Genome-Wide RNAi.”. PLoS Genet, 4, 7, Pp. e1000111. doi:10.1371/journal.pgen.1000111
Mathias Beller, Carole Sztalryd, Noel Southall, Ming Bell, Herbert Jäckle, Douglas Auld, and Brian Oliver. 2008. “COPI Complex Is a Regulator of Lipid Homeostasis.”. PLoS Biol, 6, 11, Pp. e292. doi:10.1371/journal.pbio.0060292
Mathias Beller, Carole Sztalryd, Noel Southall, Ming Bell, Herbert Jäckle, Douglas Auld, and Brian Oliver. 2008. “COPI Complex Is a Regulator of Lipid Homeostasis.”. PLoS Biol, 6, 11, Pp. e292. doi:10.1371/journal.pbio.0060292
Oaz Nir, Chris Bakal, Norbert Perrimon, and Bonnie Berger. 2010. “Inference of RhoGAP GTPase Regulation Using Single-Cell Morphological Data from a Combinatorial RNAi Screen.”. Genome Res, 20, 3, Pp. 372-80. doi:10.1101/gr.100248.109
Oaz Nir, Chris Bakal, Norbert Perrimon, and Bonnie Berger. 2010. “Inference of RhoGAP GTPase Regulation Using Single-Cell Morphological Data from a Combinatorial RNAi Screen.”. Genome Res, 20, 3, Pp. 372-80. doi:10.1101/gr.100248.109
Chaohong Wu, Joost Schulte, Katharine Sepp, Troy Littleton, and Pengyu Hong. 2010. “Automatic Robust Neurite Detection and Morphological Analysis of Neuronal Cell Cultures in High-Content Screening.”. Neuroinformatics, 8, 2, Pp. 83-100. doi:10.1007/s12021-010-9067-9
Chaohong Wu, Joost Schulte, Katharine Sepp, Troy Littleton, and Pengyu Hong. 2010. “Automatic Robust Neurite Detection and Morphological Analysis of Neuronal Cell Cultures in High-Content Screening.”. Neuroinformatics, 8, 2, Pp. 83-100. doi:10.1007/s12021-010-9067-9
Jennifer Rohn, David Sims, Tao Liu, Marina Fedorova, Frieder Schöck, Joseph Dopie, Maria Vartiainen, Amy Kiger, Norbert Perrimon, and Buzz Baum. 2011. “Comparative RNAi Screening Identifies a Conserved Core Metazoan Actinome by Phenotype.”. J Cell Biol, 194, 5, Pp. 789-805. doi:10.1083/jcb.201103168
Jennifer Rohn, David Sims, Tao Liu, Marina Fedorova, Frieder Schöck, Joseph Dopie, Maria Vartiainen, Amy Kiger, Norbert Perrimon, and Buzz Baum. 2011. “Comparative RNAi Screening Identifies a Conserved Core Metazoan Actinome by Phenotype.”. J Cell Biol, 194, 5, Pp. 789-805. doi:10.1083/jcb.201103168
Eric Joyce, Benjamin Williams, Tiao Xie, and C-Ting Wu. 2012. “Identification of Genes That Promote or Antagonize Somatic Homolog Pairing Using a High-Throughput FISH-Based Screen.”. PLoS Genet, 8, 5, Pp. e1002667. doi:10.1371/journal.pgen.1002667
Eric Joyce, Benjamin Williams, Tiao Xie, and C-Ting Wu. 2012. “Identification of Genes That Promote or Antagonize Somatic Homolog Pairing Using a High-Throughput FISH-Based Screen.”. PLoS Genet, 8, 5, Pp. e1002667. doi:10.1371/journal.pgen.1002667
Mar Arias Garcia, Miguel Sanchez Alvarez, Heba Sailem, Vicky Bousgouni, Julia Sero, and Chris Bakal. 2012. “Differential RNAi Screening Provides Insights into the Rewiring of Signalling Networks During Oxidative Stress.”. Mol Biosyst, 8, 10, Pp. 2605-13. doi:10.1039/c2mb25092f
Mar Arias Garcia, Miguel Sanchez Alvarez, Heba Sailem, Vicky Bousgouni, Julia Sero, and Chris Bakal. 2012. “Differential RNAi Screening Provides Insights into the Rewiring of Signalling Networks During Oxidative Stress.”. Mol Biosyst, 8, 10, Pp. 2605-13. doi:10.1039/c2mb25092f