Image analysis

Content tagged with Image analysis

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DRSC&TRiP at ASCB|EMBO 2018

Event
The DRSC & TRiP will be represented at the ASCB|EMBO 2018 conference in the form of a poster that includes information about our collaboration with O. Kanca in the H. Bellen lab at Baylor College of Medicine to tag Drosophila S2R+ cell lines with GFP...

Nucleolar image-based screen dataset viewable online with OMERO

News
The DRSC has worked with the HMS Image Data Management Core to make a ~3 TB image fluorescence confocal screen image dataset from the screen reported in Neumuller et al. available online. And not just available--with several interaction options! At the...

New automated imaging at the DRSC

News
The DRSC/TRiP-FGR is pleased to announce that we recently updated our high-throughput, high-content imaging system. Through funds from NIH, HHMI, and the Harvard Medical School Tools & Technology program, we were able to get a GE IN Cell 6000 automated...

Bibliographic References tagged with Image analysis

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AJ Copeland, Comjean, Perrimon, and SE Mohr. 2017. “Online View of High-Content Image Data Generated in the Genome-Wide Screen Described in Neumüller et Al. 2013, ‘Conserved Regulators of Nucleolar Size Revealed by Global Phenotypic Analyses,’ Made Possible Using OMERO at HMS”
AJ Copeland, Comjean, Perrimon, and SE Mohr. 2017. “Online View of High-Content Image Data Generated in the Genome-Wide Screen Described in Neumüller et Al. 2013, ‘Conserved Regulators of Nucleolar Size Revealed by Global Phenotypic Analyses,’ Made Possible Using OMERO at HMS”
Joel Swenson, Serafin Colmenares, Amy Strom, Sylvain Costes, and Gary Karpen. 2016. “The Composition and Organization of Drosophila Heterochromatin Are Heterogeneous and Dynamic.”. Elife, 5. doi:10.7554/eLife.16096
Joel Swenson, Serafin Colmenares, Amy Strom, Sylvain Costes, and Gary Karpen. 2016. “The Composition and Organization of Drosophila Heterochromatin Are Heterogeneous and Dynamic.”. Elife, 5. doi:10.7554/eLife.16096
2015. “DRSC: RNA Binding Protein Library S2R+ Baseline Data (data Support Page for Mohr et Al. 2015 ‘Reagent and Data Resources for Investigation of RNA Binding Protein Functions in Drosophila Melanogaster Cultured Cells’ in G3)”
2015. “DRSC: RNA Binding Protein Library S2R+ Baseline Data (data Support Page for Mohr et Al. 2015 ‘Reagent and Data Resources for Investigation of RNA Binding Protein Functions in Drosophila Melanogaster Cultured Cells’ in G3)”
Jennifer Rohn, David Sims, Tao Liu, Marina Fedorova, Frieder Schöck, Joseph Dopie, Maria Vartiainen, Amy Kiger, Norbert Perrimon, and Buzz Baum. 2011. “Comparative RNAi Screening Identifies a Conserved Core Metazoan Actinome by Phenotype.”. J Cell Biol, 194, 5, Pp. 789-805. doi:10.1083/jcb.201103168
Jennifer Rohn, David Sims, Tao Liu, Marina Fedorova, Frieder Schöck, Joseph Dopie, Maria Vartiainen, Amy Kiger, Norbert Perrimon, and Buzz Baum. 2011. “Comparative RNAi Screening Identifies a Conserved Core Metazoan Actinome by Phenotype.”. J Cell Biol, 194, 5, Pp. 789-805. doi:10.1083/jcb.201103168
Eric Joyce, Benjamin Williams, Tiao Xie, and C-Ting Wu. 2012. “Identification of Genes That Promote or Antagonize Somatic Homolog Pairing Using a High-Throughput FISH-Based Screen.”. PLoS Genet, 8, 5, Pp. e1002667. doi:10.1371/journal.pgen.1002667
Eric Joyce, Benjamin Williams, Tiao Xie, and C-Ting Wu. 2012. “Identification of Genes That Promote or Antagonize Somatic Homolog Pairing Using a High-Throughput FISH-Based Screen.”. PLoS Genet, 8, 5, Pp. e1002667. doi:10.1371/journal.pgen.1002667
Mar Arias Garcia, Miguel Sanchez Alvarez, Heba Sailem, Vicky Bousgouni, Julia Sero, and Chris Bakal. 2012. “Differential RNAi Screening Provides Insights into the Rewiring of Signalling Networks During Oxidative Stress.”. Mol Biosyst, 8, 10, Pp. 2605-13. doi:10.1039/c2mb25092f
Mar Arias Garcia, Miguel Sanchez Alvarez, Heba Sailem, Vicky Bousgouni, Julia Sero, and Chris Bakal. 2012. “Differential RNAi Screening Provides Insights into the Rewiring of Signalling Networks During Oxidative Stress.”. Mol Biosyst, 8, 10, Pp. 2605-13. doi:10.1039/c2mb25092f
Marcelo Perez-Pepe, Victoria Slomiansky, Mariela Loschi, Luciana Luchelli, Maximiliano Neme, María Gabriela Thomas, and Graciela Lidia Boccaccio. 2012. “BUHO: A MATLAB Script for the Study of Stress Granules and Processing Bodies by High-Throughput Image Analysis.”. PLoS One, 7, 12, Pp. e51495. doi:10.1371/journal.pone.0051495
Marcelo Perez-Pepe, Victoria Slomiansky, Mariela Loschi, Luciana Luchelli, Maximiliano Neme, María Gabriela Thomas, and Graciela Lidia Boccaccio. 2012. “BUHO: A MATLAB Script for the Study of Stress Granules and Processing Bodies by High-Throughput Image Analysis.”. PLoS One, 7, 12, Pp. e51495. doi:10.1371/journal.pone.0051495
Zheng Yin, Amine Sadok, Heba Sailem, Afshan McCarthy, Xiaofeng Xia, Fuhai Li, Mar Arias Garcia, Louise Evans, Alexis Barr, Norbert Perrimon, Christopher Marshall, Stephen Wong, and Chris Bakal. 2013. “A Screen for Morphological Complexity Identifies Regulators of Switch-Like Transitions Between Discrete Cell Shapes.”. Nat Cell Biol, 15, 7, Pp. 860-71. doi:10.1038/ncb2764
Zheng Yin, Amine Sadok, Heba Sailem, Afshan McCarthy, Xiaofeng Xia, Fuhai Li, Mar Arias Garcia, Louise Evans, Alexis Barr, Norbert Perrimon, Christopher Marshall, Stephen Wong, and Chris Bakal. 2013. “A Screen for Morphological Complexity Identifies Regulators of Switch-Like Transitions Between Discrete Cell Shapes.”. Nat Cell Biol, 15, 7, Pp. 860-71. doi:10.1038/ncb2764
Ralph Neumüller, Thomas Gross, Anastasia Samsonova, Arunachalam Vinayagam, Michael Buckner, Karen Founk, Yanhui Hu, Sara Sharifpoor, Adam Rosebrock, Brenda Andrews, Fred Winston, and Norbert Perrimon. 2013. “Conserved Regulators of Nucleolar Size Revealed by Global Phenotypic Analyses.”. Sci Signal, 6, 289, Pp. ra70. doi:10.1126/scisignal.2004145
Ralph Neumüller, Thomas Gross, Anastasia Samsonova, Arunachalam Vinayagam, Michael Buckner, Karen Founk, Yanhui Hu, Sara Sharifpoor, Adam Rosebrock, Brenda Andrews, Fred Winston, and Norbert Perrimon. 2013. “Conserved Regulators of Nucleolar Size Revealed by Global Phenotypic Analyses.”. Sci Signal, 6, 289, Pp. ra70. doi:10.1126/scisignal.2004145
Inma Gonzalez, Julio Mateos-Langerak, Aubin Thomas, Thierry Cheutin, and Giacomo Cavalli. 2014. “Identification of Regulators of the Three-Dimensional Polycomb Organization by a Microscopy-Based Genome-Wide RNAi Screen.”. Mol Cell, 54, 3, Pp. 485-99. doi:10.1016/j.molcel.2014.03.004
Inma Gonzalez, Julio Mateos-Langerak, Aubin Thomas, Thierry Cheutin, and Giacomo Cavalli. 2014. “Identification of Regulators of the Three-Dimensional Polycomb Organization by a Microscopy-Based Genome-Wide RNAi Screen.”. Mol Cell, 54, 3, Pp. 485-99. doi:10.1016/j.molcel.2014.03.004