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33 results for "Off-target analysis"

33 results for "Off-target analysis"

Online GESS

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Description Genome-wide Enrichment of Seed Sequence matches (GESS) was originally developed by Sigoillot, King, and colleagues for analysis of RNAi screen data sets. The approach is useful to identify candidate off-targeted transcripts from direct...

CRISPR Efficiency Prediction

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Part of our "Find CRISPRs" design suite, our Efficiency Predictor evaluation tool compares the nucleotide sequence of short guide RNA (gRNA) designs against our algorithms for optimal efficiency. Note that this tool does not evaluate potential off targets...

RNAi screening: new approaches, understandings, and organisms.

Journal Article

RNA interference (RNAi) leads to sequence-specific knockdown of gene function. The approach can be used in large-scale screens to interrogate function in various model organisms and an increasing number of other species. Genome-scale RNAi screens are...

Online GESS Documentation

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URL http://www.flyrnai.org/gess/ Online GESS Tool (Version 1) BACKGROUND RNAi is a widely used and valuable genetics tool to study gene function, but it is vulnerable to some off-target effects representing a significant source of false positive results...

RNAi screening in Drosophila cells and in vivo.

Journal Article

Here, I discuss how RNAi screening can be used effectively to uncover gene function. Specifically, I discuss the types of high-throughput assays that can be done in Drosophila cells and in vivo, RNAi reagent design and available reagent collections...

DRSC & TRiP Workshop at ADRC

Event
The DRSC & TRiP will be hosting a workshop at the Annual Drosophila Research Conference in Philadelphia, PA. The workshop is scheduled for Friday, April 13th from 1:45 to 3:45 PM. Come hear from DRSC & TRiP leaders Norbert Perrimon, Jonathan Zirin...

Now Available: Our 2017 NAR database issue update

News
Read about the DRSC/TRiP Functional Genomics Resources online tools and more in our 2017 Nucleic Acids Research database issue update publication. Tables 1 & 2 in particular are meant to give you a quick look at what online tools we offer and how they fit...