Human
Content tagged with Human
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News
We are excited to launch our DRscDB online resource for mining of single-cell RNAseq data sets from Drosophila and other species. You can read more about the resource in our BioRxiv preprint.
New publications from the DRSC bioinformatics team
News
The DRSC bioinformatics team, led by Dr. Claire Yanhui Hu, has recently published two new papers. One reports development of BioLitMine, an advanced literature mining resource. The other provides an overview of our online resources, which can be grouped...
DRSC-Biomedical Technology Research Resource
News
We are pleased to announce that we have been funded by NIH NIGMS to form the Drosophila Research & Screening Center-Biomedical Technology Research Resource (DRSC-BTRR). The P41-funded DRSC-BTRR (N. Perrimon, PI; S. Mohr, Co-I) builds upon and extends past...
Drosophila cell screen with DRSC reagent library contributes to identification of new therapeutic target for renal cancer
News
We here at the DRSC/TRiP are thrilled to see this study from Hilary Nicholson et al. published in Science Signaling. The study provides a great example of how screens in Drosophila cultured cells can be used as part of a cross-species platform aimed at...
Navigating our online tools -- orthologs, literature mining, qPCR primers, and so much more!
News
We have been taking a critical look at how we organize our online tools on the Online Tools Overview page. And more generally, we have been thinking about new ways to spread the word about the many resources in our suite of online tools. One way that we...
DRSC Bioinformatics launches iProteinDB and BioLitMine
News
We have two new online tools available: iProteinDB and BioLitMine. Both continue our series of resources aimed at integrating existing information in new ways to facilitate data mining and development of new hypotheses. In addition, iProteinDB includes a...
Variable Dose Analysis: a new DRSC-supported cell screen approach that leverages existing reagents to perform robust screens
News
We are excited to report the publication of a paper from Benjamin Housden and colleagues describing development and use of the Variable Dose Analysis (VDA) approach. Ben developed a way to use existing TRiP shRNA plasmids originally developed for fly...
Tutorial on DIOPT ortholog search tool scores, ranks and 'best' matches
News
In response to a request placed using our bug report form, we have put together a YouTube video demonstration that explains the scores, ranks, and 'best' matches that appear as part of the results tables at the DRSC Integrative Ortholog Precition Tool or...
New automated imaging at the DRSC
News
The DRSC/TRiP-FGR is pleased to announce that we recently updated our high-throughput, high-content imaging system. Through funds from NIH, HHMI, and the Harvard Medical School Tools & Technology program, we were able to get a GE IN Cell 6000 automated...
DIOPT 6.0 released -- with eggNOG and paralog searches added
News
DIOPT 6.0 went live this week. Newly added features include results from eggNOG, bringing the total number of alrogithms incorporated in our integrated search tool to 14. In addition, you can now search for paralogs. To do this, choose the same species...
Bibliographic References tagged with Human
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Adam Friedman and Norbert Perrimon. 2006. “A Functional RNAi Screen for Regulators of Receptor Tyrosine Kinase and ERK Signalling.”. Nature, 444, 7116, Pp. 230-4. doi:10.1038/nature05280
Adam Friedman and Norbert Perrimon. 2006. “A Functional RNAi Screen for Regulators of Receptor Tyrosine Kinase and ERK Signalling.”. Nature, 444, 7116, Pp. 230-4. doi:10.1038/nature05280
Joost Schulte, Katharine Sepp, Chaohong Wu, Pengyu Hong, and Troy Littleton. 2011. “High-Content Chemical and RNAi Screens for Suppressors of Neurotoxicity in a Huntington’s Disease Model.”. PLoS One, 6, 8, Pp. e23841. doi:10.1371/journal.pone.0023841
Joost Schulte, Katharine Sepp, Chaohong Wu, Pengyu Hong, and Troy Littleton. 2011. “High-Content Chemical and RNAi Screens for Suppressors of Neurotoxicity in a Huntington’s Disease Model.”. PLoS One, 6, 8, Pp. e23841. doi:10.1371/journal.pone.0023841
Yousang Gwack, Sonal Srikanth, Stefan Feske, Fernando Cruz-Guilloty, Masatsugu Oh-hora, Daniel Neems, Patrick Hogan, and Anjana Rao. 2007. “Biochemical and Functional Characterization of Orai Proteins.”. J Biol Chem, 282, 22, Pp. 16232-43. doi:10.1074/jbc.M609630200
Yousang Gwack, Sonal Srikanth, Stefan Feske, Fernando Cruz-Guilloty, Masatsugu Oh-hora, Daniel Neems, Patrick Hogan, and Anjana Rao. 2007. “Biochemical and Functional Characterization of Orai Proteins.”. J Biol Chem, 282, 22, Pp. 16232-43. doi:10.1074/jbc.M609630200
Stephanie Mohr and Norbert Perrimon. 2012. “RNAi Screening: New Approaches, Understandings, and Organisms.”. Wiley Interdiscip Rev RNA, 3, 2, Pp. 145-58. doi:10.1002/wrna.110
Stephanie Mohr and Norbert Perrimon. 2012. “RNAi Screening: New Approaches, Understandings, and Organisms.”. Wiley Interdiscip Rev RNA, 3, 2, Pp. 145-58. doi:10.1002/wrna.110
Lan Xu, Xiaohao Yao, Xiaochu Chen, Peiyuan Lu, Biliang Zhang, and Tony Ip. 2007. “Msk Is Required for Nuclear Import of TGF-{beta} BMP-Activated Smads.”. J Cell Biol, 178, 6, Pp. 981-94. doi:10.1083/jcb.200703106
Lan Xu, Xiaohao Yao, Xiaochu Chen, Peiyuan Lu, Biliang Zhang, and Tony Ip. 2007. “Msk Is Required for Nuclear Import of TGF-{beta} BMP-Activated Smads.”. J Cell Biol, 178, 6, Pp. 981-94. doi:10.1083/jcb.200703106
Isabelle Derré, Marc Pypaert, Alice Dautry-Varsat, and Hervé Agaisse. 2007. “RNAi Screen in Drosophila Cells Reveals the Involvement of the Tom Complex in Chlamydia Infection.”. PLoS Pathog, 3, 10, Pp. 1446-58. doi:10.1371/journal.ppat.0030155
Isabelle Derré, Marc Pypaert, Alice Dautry-Varsat, and Hervé Agaisse. 2007. “RNAi Screen in Drosophila Cells Reveals the Involvement of the Tom Complex in Chlamydia Infection.”. PLoS Pathog, 3, 10, Pp. 1446-58. doi:10.1371/journal.ppat.0030155
Caroline Yi, Dodzie Sogah, Michael Boyce, Alexei Degterev, Dana Christofferson, and Junying Yuan. 2007. “A Genome-Wide RNAi Screen Reveals Multiple Regulators of Caspase Activation.”. J Cell Biol, 179, 4, Pp. 619-26. doi:10.1083/jcb.200708090
Caroline Yi, Dodzie Sogah, Michael Boyce, Alexei Degterev, Dana Christofferson, and Junying Yuan. 2007. “A Genome-Wide RNAi Screen Reveals Multiple Regulators of Caspase Activation.”. J Cell Biol, 179, 4, Pp. 619-26. doi:10.1083/jcb.200708090
Joshua Stender, Gabriel Pascual, Wen Liu, Minna Kaikkonen, Kevin Do, Nathanael Spann, Michael Boutros, Norbert Perrimon, Michael Rosenfeld, and Christopher Glass. 2012. “Control of Proinflammatory Gene Programs by Regulated Trimethylation and Demethylation of Histone H4K20.”. Mol Cell, 48, 1, Pp. 28-38. doi:10.1016/j.molcel.2012.07.020
Joshua Stender, Gabriel Pascual, Wen Liu, Minna Kaikkonen, Kevin Do, Nathanael Spann, Michael Boutros, Norbert Perrimon, Michael Rosenfeld, and Christopher Glass. 2012. “Control of Proinflammatory Gene Programs by Regulated Trimethylation and Demethylation of Histone H4K20.”. Mol Cell, 48, 1, Pp. 28-38. doi:10.1016/j.molcel.2012.07.020
Stephanie Stotz and David Clapham. 2012. “Anion-Sensitive Fluorophore Identifies the Drosophila Swell-Activated Chloride Channel in a Genome-Wide RNA Interference Screen.”. PLoS One, 7, 10, Pp. e46865. doi:10.1371/journal.pone.0046865
Stephanie Stotz and David Clapham. 2012. “Anion-Sensitive Fluorophore Identifies the Drosophila Swell-Activated Chloride Channel in a Genome-Wide RNA Interference Screen.”. PLoS One, 7, 10, Pp. e46865. doi:10.1371/journal.pone.0046865
Keren Imberg-Kazdan, Susan Ha, Alex Greenfield, Christopher Poultney, Richard Bonneau, Susan Logan, and Michael Garabedian. 2013. “A Genome-Wide RNA Interference Screen Identifies New Regulators of Androgen Receptor Function in Prostate Cancer Cells.”. Genome Res, 23, 4, Pp. 581-91. doi:10.1101/gr.144774.112
Keren Imberg-Kazdan, Susan Ha, Alex Greenfield, Christopher Poultney, Richard Bonneau, Susan Logan, and Michael Garabedian. 2013. “A Genome-Wide RNA Interference Screen Identifies New Regulators of Androgen Receptor Function in Prostate Cancer Cells.”. Genome Res, 23, 4, Pp. 581-91. doi:10.1101/gr.144774.112