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COMPLEAT Documentation

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URL http://www.flyrnai.org/compleat/ Data upload page Species: The user may choose human, fly or yeast Data files: The user may upload multiple datasets in one file or multiple files. Tab-separated text files, and excel files (.xls, .xlsx, .xlsm) will be...

DRSC/TRiP and DRSC-BTRR Office Hours

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New this fall: Online office hours! Do you have questions about modifying Drosophila cell lines with CRISPR or performing large-scale cell screens? Questions about in vivo RNAi with TRiP fly stocks or CRISPR knockout or activation with our sgRNA fly...

Cell-based RNAi (DRSC)

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Quick link to Gene Lookup (search screen data) Quick link to UP-TORR (view cell & in vivo reagents) Drosophila cell-based RNAi screens have been supported by our facility since 2003. We provide reagents targeting individual genes, focused libraries...

Plasmid clones and data available from the FlyBi project

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The DRSC is collaborating with the Berkeley Drosophila Genome Project and the DFCI Center for Cancer Systems Biology on a large-scale Drosophila binary protein interaction project, the FlyBi project. We have deposited Drosophila ORFs in Gateway vectors at...

Methods and tools for spatial mapping of single-cell RNAseq clusters in Drosophila

Journal Article

Single-cell RNA sequencing (scRNAseq) experiments provide a powerful means to identify clusters of cells that share common gene expression signatures. A major challenge in scRNAseq studies is to map the clusters to specific anatomical regions along the...

Zinc Detoxification: A Functional Genomics and Transcriptomics Analysis in Drosophila melanogaster Cultured Cells

Journal Article

Cells require some metals, such as zinc and manganese, but excess levels of these metals can be toxic. As a result, cells have evolved complex mechanisms for maintaining metal homeostasis and surviving metal intoxication. Here, we present the results of a...

About

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DRSC Functional Genomics Resources (DRSC-FGR) began as the Drosophila RNAi Screening Center (DRSC), founded by Prof. Norbert Perrimon in 2003, and the Transgenic RNAi Project (TRiP), founded by Prof. Perrimon in 2008. We have since grown into a functional...

TF2TG: an online resource mining the potential gene targets of transcription factors in .

Journal Article

Sequence-specific transcription factors (TFs) are key regulators of many biological processes, controlling the expression of their target genes through binding to the cis- regulatory regions such as promoters and enhancers. Each TF has unique DNA binding...

TF2TG: an online resource mining the potential gene targets of transcription factors in Drosophila.

Journal Article

Sequence-specific transcription factors (TFs) are key regulators of many biological processes, controlling the expression of their target genes through binding to the cis- regulatory regions such as promoters and enhancers. Each TF has unique DNA binding...

BioLitMine: Advanced Mining of Biomedical and Biological Literature About Human Genes and Genes from Major Model Organisms

Journal Article

The accumulation of biological and biomedical literature outpaces the ability of most researchers and clinicians to stay abreast of their own immediate fields, let alone a broader range of topics. Although available search tools support identification of...

Gene2Function: An Integrated Online Resource for Gene Function Discovery

Journal Article

One of the most powerful ways to develop hypotheses regarding biological functions of conserved genes in a given species, such as in humans, is to first look at what is known about function in another species. Model organism databases (MODs) and other...

DRSC: RNA Binding Protein Library S2R+ Baseline Data (data support page for Mohr et al. 2015 "Reagent and Data Resources for Investigation of RNA Binding Protein Functions in Drosophila melanogaster Cultured Cells" in G3)

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79 results for "Data mining"

79 results for "Data mining"

COMPLEAT Documentation

DRSC/TRiP and DRSC-BTRR Office Hours

Cell-based RNAi (DRSC)

Plasmid clones and data available from the FlyBi project

Methods and tools for spatial mapping of single-cell RNAseq clusters in Drosophila

Zinc Detoxification: A Functional Genomics and Transcriptomics Analysis in Drosophila melanogaster Cultured Cells

About

TF2TG: an online resource mining the potential gene targets of transcription factors in .

TF2TG: an online resource mining the potential gene targets of transcription factors in Drosophila.

BioLitMine: Advanced Mining of Biomedical and Biological Literature About Human Genes and Genes from Major Model Organisms

Gene2Function: An Integrated Online Resource for Gene Function Discovery

DRSC: RNA Binding Protein Library S2R+ Baseline Data (data support page for Mohr et al. 2015 "Reagent and Data Resources for Investigation of RNA Binding Protein Functions in Drosophila melanogaster Cultured Cells" in G3)