Protein interactions

Content tagged with Protein interactions

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Plasmid clones and data available from the FlyBi project

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The DRSC is collaborating with the Berkeley Drosophila Genome Project and the DFCI Center for Cancer Systems Biology on a large-scale Drosophila binary protein interaction project, the FlyBi project. We have deposited Drosophila ORFs in Gateway vectors at...

Bibliographic References tagged with Protein interactions

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Ah-Ram Kim, Yanhui Hu, Aram Comjean, Jonathan Rodiger, Stephanie Mohr, and Norbert Perrimon. 2024. “Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer”. BioRxiv, Pp. 2024.02.19.580970
Ah-Ram Kim, Yanhui Hu, Aram Comjean, Jonathan Rodiger, Stephanie Mohr, and Norbert Perrimon. 2024. “Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer”. BioRxiv, Pp. 2024.02.19.580970
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth Wan, Joel Bader, Dawit Balcha, Wenting Bian, Benjamin Booth, Atina Coté, Steffi de Rouck, Alice Desbuleux, Kah Goh, Dae-Kyum Kim, Jennifer Knapp, Wen Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael Calderwood, David Hill, Susan Celniker, Marc Vidal, Norbert Perrimon, and Stephanie E. Mohr. 2023. “Next-Generation Large-Scale Binary Protein Interaction Network for Drosophila Melanogaster”, 14, 1, Pp. 2162
Hong-Wen Tang, Kerstin Spirohn, Yanhui Hu, Tong Hao, István Kovács, Yue Gao, Richard Binari, Donghui Yang-Zhou, Kenneth Wan, Joel Bader, Dawit Balcha, Wenting Bian, Benjamin Booth, Atina Coté, Steffi de Rouck, Alice Desbuleux, Kah Goh, Dae-Kyum Kim, Jennifer Knapp, Wen Lee, Irma Lemmens, Cathleen Li, Mian Li, Roujia Li, Hyobin Lim, Yifang Liu, Katja Luck, Dylan Markey, Carl Pollis, Sudharshan Rangarajan, Jonathan Rodiger, Sadie Schlabach, Yun Shen, Dayag Sheykhkarimli, Bridget TeeKing, Frederick P. Roth, Jan Tavernier, Michael Calderwood, David Hill, Susan Celniker, Marc Vidal, Norbert Perrimon, and Stephanie E. Mohr. 2023. “Next-Generation Large-Scale Binary Protein Interaction Network for Drosophila Melanogaster”, 14, 1, Pp. 2162
Yanhui Hu, Arunachalam Vinayagam, Ankita Nand, Aram Comjean, Verena Chung, Tong Hao, Stephanie Mohr, and Norbert Perrimon. 2017. “Molecular Interaction Search Tool (MIST): An Integrated Resource for Mining Gene and Protein Interaction Data”. Nucleic Acids Res, 46, D1, Pp. D567-D574. doi:10.1093/nar/gkx1116
Yanhui Hu, Arunachalam Vinayagam, Ankita Nand, Aram Comjean, Verena Chung, Tong Hao, Stephanie Mohr, and Norbert Perrimon. 2017. “Molecular Interaction Search Tool (MIST): An Integrated Resource for Mining Gene and Protein Interaction Data”. Nucleic Acids Res, 46, D1, Pp. D567-D574. doi:10.1093/nar/gkx1116
Arunachalam Vinayagam, Meghana Kulkarni, Richelle Sopko, Xiaoyun Sun, Yanhui Hu, Ankita Nand, Christians Villalta, Ahmadali Moghimi, Xuemei Yang, Stephanie Mohr, Pengyu Hong, John Asara, and Norbert Perrimon. 2016. “An Integrative Analysis of the InR PI3K Akt Network Identifies the Dynamic Response to Insulin Signaling”. Cell Reports, 16, 11, Pp. 3062-74
Arunachalam Vinayagam, Meghana Kulkarni, Richelle Sopko, Xiaoyun Sun, Yanhui Hu, Ankita Nand, Christians Villalta, Ahmadali Moghimi, Xuemei Yang, Stephanie Mohr, Pengyu Hong, John Asara, and Norbert Perrimon. 2016. “An Integrative Analysis of the InR PI3K Akt Network Identifies the Dynamic Response to Insulin Signaling”. Cell Reports, 16, 11, Pp. 3062-74
Amy Wiles, Mark Doderer, Jianhua Ruan, Ting-Ting Gu, Dashnamoorthy Ravi, Barron Blackman, and Alexander Bishop. 2010. “Building and Analyzing Protein Interactome Networks by Cross-Species Comparisons.”. BMC Syst Biol, 4, Pp. 36. doi:10.1186/1752-0509-4-36
Amy Wiles, Mark Doderer, Jianhua Ruan, Ting-Ting Gu, Dashnamoorthy Ravi, Barron Blackman, and Alexander Bishop. 2010. “Building and Analyzing Protein Interactome Networks by Cross-Species Comparisons.”. BMC Syst Biol, 4, Pp. 36. doi:10.1186/1752-0509-4-36